Hi Adam, yes, a newer version is hiding. Best, Martin

P.S. it is still unclear if this will make it into 6.0. But if we get lucky with a long delay of the release, the chances will significantly increase ;-)

On 08/01/2016 06:50 PM, Thomas, Adam (NIH/NIMH) [E] wrote:

This look very cool: https://surfer.nmr.mgh.harvard.edu/fswiki/LongitudinalHippocampalSubfields

But the flag is not being recognized by recon-all using the most recent build:

[adamt@felix scratch]$ cat $FREESURFER_HOME/build-stamp.txt freesurfer-Linux-centos6_x86_64-dev-20160730-bda65ec [adamt@felix scratch]$ recon-all -long-hippocampal-subfields-T1 md105Templ -hsfTP md105-1.long.md105Templ -hsfTP md105-2.long.md105Templ -hsfTP md105-3.long.md105Templ -hsfTP md105-4.long.md105Temp1 -hsfTP md105-5.long.md105Templ

ERROR: Flag -long-hippocampal-subfields-T1 unrecognized. -long-hippocampal-subfields-T1 md105Templ -hsfTP md105-1.long.md105Templ -hsfTP md105-2.long.md105Templ -hsfTP md105-3.long.md105Templ -hsfTP md105-4.long.md105Temp1 -hsfTP md105-5.long.md105Templ Linux felix.nimh.nih.gov 2.6.32-642.3.1.el6.x86_64 #1 SMP Tue Jul 12 18:30:56 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux

recon-all -s exited with ERRORS at Mon Aug 1 18:42:51 EDT 2016

For more details, see the log file To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

[adamt@felix scratch]$ uname -a Linux felix.nimh.nih.gov 2.6.32-642.3.1.el6.x86_64 #1 SMP Tue Jul 12 18:30:56 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux [adamt@felix scratch]$ which recon-all /data/adamt/Apps/fs6-2016-07-31/bin/recon-all [adamt@felix scratch]$

Is there a newer version of recon-all hiding somewhere?

Thanks, -Adam

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