Hi Bruce, Thanks Bruce. I see. I will try. All the best. Rujing Zha

2014-02-15

charujing123

发件人：Bruce Fischl fischl@nmr.mgh.harvard.edu 发送时间：2014-02-15 12:26 主题：Re: [Freesurfer] recon-all pial reconstruction error 收件人："charujing123"charujing123@163.com 抄送："freesurfer@nmr.mgh.harvard.edu"freesurfer@nmr.mgh.harvard.edu

Hi Rujing

It looks to me like there is a bunch of anterior temporal wm that is missed, either because of a bias field or lack of myelination if it is a kid or a disease. Try putting some control points in the wm and see if that fixes things. Usually the pial surface being wrong is because the white is wrong. cheers Bruce

On Feb 14, 2014, at 10:32 PM, "charujing123"charujing123@163.com wrote:

Hi FS experts, After running the recon-all -s CON_EIU12, I found some inappropriate error in pial reconstruction, which can be got in the attachment. I knew how to remove voxels from GM areas. But I did not know how to add some voxels into GM area in this case. Thanks. All the best. Rujing Zha

2014-02-15

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