Hello,
I apologize if my question is too basic, but I am trying to pull up cortical parcellation surfaces for my data, like shown here: http://surfer.nmr.mgh.harvard.edu/fswiki/CorticalParcellation
I tried typing in "tksurfer subjec_number lh inflated -aparc", but that produces the lateral surface using the 2005 atlas. Can you help me by suggesting which command can pull up parcellated surfaces using the 2009 atlas? Putting in "-aparc.a2009s" does not seem to work (no parcellation is shown). I would like to see both lateral and medial surfaces, if possible.
Thank you in advance! Sincerely,
Maria
**************************************** Maria Kharitonova, Ph.D. Laboratory of Cognitive Neuroscience Children's Hospital Boston
Hi Maria
you can use the file menu to load the parcellation (file->label->import annotation or something like that), then use the file browser to select the one you want.
cheers Bruce
On Mon, 16 Jul 2012, Maria Kharitonova wrote:
Hello,
I apologize if my question is too basic, but I am trying to pull up cortical parcellation surfaces for my data, like shown here: http://surfer.nmr.mgh.harvard.edu/fswiki/CorticalParcellation
I tried typing in "tksurfer subjec_number lh inflated -aparc", but that produces the lateral surface using the 2005 atlas. Can you help me by suggesting which command can pull up parcellated surfaces using the 2009 atlas? Putting in "-aparc.a2009s" does not seem to work (no parcellation is shown). I would like to see both lateral and medial surfaces, if possible.
Thank you in advance! Sincerely,
Maria
Maria Kharitonova, Ph.D. Laboratory of Cognitive Neuroscience Children's Hospital Boston _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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