So ismac.m is not defined in your matlab implementation? What version of matlab are you using? What kind of computer are you running on?

On 02/02/2017 01:48 PM, aral ahmadi wrote:

Dear experts

I have a question regarding Freesurfer- LGI error I got during running LGI after all recon steps been ran with no problem. you could see the error below.

*reading filled volume...

*??? undefined function or variable 'ismac'.* *error in -->load_mgh at 68*

*if(strcmp(computer,'MAC') || strcmp(computer,'MAC') || ismac)*

*error in -->MRIread at 87*

*[mri, voi, M, mr_parms, volsz] = load_mgh (fspec, [], [], headeronly);*

*error in --> make outer-surface at 24*

*vol = MRIread(filled_volume);* ** *>> ERROR:make _outer_surface did not creat output file 'net/storage1/usr2/onrc/home/p2/Aahmadi/onrc/data/Aral-july/test/subject* *Linux compute31 2.6.32-504.12.2.e16.*86_64 #1 SMP Wed Mar11 UTC 2015 86_64 86_64 GNU/Linux*

*recon-all -s S1091RPY existed with Errors at thu jan19 2017*

The error is ...Undefined function or variable 'ismac' - matlab is expecting that variable to be defined (it's trying to detect the OS, whether Linux, windows/ Mac), but it isn't. *

I appreciate if you give me your advice on this issue.

Thanks,

Aral

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