Hi All,
I tried a runnings some recons (one recon entirely in Stable 5.1.0 using the -hippo-subregions flag, and one recon in Stable 4.5.0 followed by "recon-all -hippo-subregions" in 5.1.0), and I am running into a small problem in that the posterior_Left-Hippocampus.mgz file does not seem to be created (in either case). It looks like all of the other subregion files are there, but it is missing the one file, which is causing the kv1* quantification script and viewing the left hippo subregions to fail (I can view the right ones just fine though). However, the recon did not exit with errors, and I don't see any errors in the log file. Any thoughts?
Thanks, Garth
freesurfer@nmr.mgh.harvard.edu