External Email - Use Caution
Hi,
First I tried to use my original mask which is a gifti with a single darray as NIFTI_INTENT_ESTIMATE that contains 0 or 1 for each vertex.
But I got it:
"
** DA[0] has coordsys with intent NIFTI_INTENT_ESTIMATE (should be NIFTI_INTENT_POINTSET) MRISreadGiftiAsMRI: no overlay data found in file [filename]
"
So I changed darray to a new one that contains only the list of the point coordinates where my mask is equal to 1 (and use NIFTI_INTENT_POINTSET) and now I have only this error:
" MRISreadGiftiAsMRI: no overlay data found in file [filename] "
Bastien
Hi Bastien
can you send us the full command lines and screen output of whatever you have run?
cheers Bruce On Thu, 7 Mar 2019, CAGNA Bastien wrote:
External Email - Use Caution
Hi,
First I tried to use my original mask which is a gifti with a single darray as NIFTI_INTENT_ESTIMATE that contains 0 or 1 for each vertex.
But I got it:
"
** DA[0] has coordsys with intent NIFTI_INTENT_ESTIMATE (should be NIFTI_INTENT_POINTSET) MRISreadGiftiAsMRI: no overlay data found in file [filename]
"
So I changed darray to a new one that contains only the list of the point coordinates where my mask is equal to 1 (and use NIFTI_INTENT_POINTSET) and now I have only this error:
" MRISreadGiftiAsMRI: no overlay data found in file [filename] "
Bastien
freesurfer@nmr.mgh.harvard.edu