Hi,
So when using command tkmedit *subjID* brainmask.mgz -aux -wm.mgz -surfs I receive the message:
"Error: Parsing -aux option Expected an argument This option needs an argument: the image type, directory, or file name of the data to load as the aux volume."
My apologies if there is an obvious answer but I can't see what is wrong (there are wm.mgz files in all subject directories), plus there doesn't seem to be anything missing as a result of this error message.
Cheers for your help, Best, Hugh
Hi,
I have resolved the issue below, apologies, was a stupid question!
Thanks, Hugh
On 1 August 2012 15:59, Hugh Pemberton hughpemberton1@gmail.com wrote:
Hi,
So when using command tkmedit *subjID* brainmask.mgz -aux -wm.mgz -surfs I receive the message:
"Error: Parsing -aux option Expected an argument This option needs an argument: the image type, directory, or file name of the data to load as the aux volume."
My apologies if there is an obvious answer but I can't see what is wrong (there are wm.mgz files in all subject directories), plus there doesn't seem to be anything missing as a result of this error message.
Cheers for your help, Best, Hugh
Hi Hugh, you need to supply an volume to -aux (eg, -aux orig.mgz) doug
On 08/01/2012 01:59 AM, Hugh Pemberton wrote:
Hi,
So when using command tkmedit *subjID* brainmask.mgz -aux -wm.mgz -surfs I receive the message:
"Error: Parsing -aux option Expected an argument This option needs an argument: the image type, directory, or file name of the data to load as the aux volume."
My apologies if there is an obvious answer but I can't see what is wrong (there are wm.mgz files in all subject directories), plus there doesn't seem to be anything missing as a result of this error message.
Cheers for your help, Best, Hugh
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