sorry, no. You pretty much need to do everything

Bruce On Wed, 7 Sep 2016, djpeters@u.washington.edu wrote:

Hi Freesurfer list,

Say I was interested ONLY in extracting the pial surface for the purpose of getting a 3D print of a brain. Are there any time-intensive steps that can I safely exclude from the recon-all pipeline? For example, if I exclude the CARegister step ( -nocareg ), will I still get a good pial surface?

Thanks so much, -Dan

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