I think it will be easier with mris_apply_reg. You might need to get the newest version with can handle labels

ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_apply_reg

run it something like mris_apply_reg --src-label lh.source.label --streg lh.sphere.left_right rh.sphere.left_right --trg rh.lh.source.label

doug

On 06/17/2016 10:33 AM, Alexandre Routier wrote:

Hello,

I am a little but confused with the syntax: I have a drawn label lh.manual.label and I want it on the right hemisphere and I was thinking of this command: mri_label2label --srcsurfreg lh.sphere.reg --targsurfreg rh.sphere.reg --surfreg lh.sphere.left_right --regmethod surface --hemi lh --srclabel lh.manual.label --targlabel rh.manual.label

(I have the following sphere files for my subject : ?h.qsphere.nofix, ?h.sphere, ?h.sphere.left_right, ?h.sphere.reg)

I don't see how to include ?h.sphere.left_right to the command line.

Alexandre

2016-06-16 18:53 GMT+02:00 Bruce Fischl <fischl@nmr.mgh.harvard.edu mailto:fischl@nmr.mgh.harvard.edu>:

Hi Alexandre

try mri_label2label using the ?h.sphere.left_right

cheers
Bruce

On Thu, 16 Jun 2016, Alexandre Routier wrote:

    Hello everyone,
    I have a label for the left hemisphere for my subject but I
    don't understand
    the syntax to apply mris_apply_reg on this label to obtain the
    right
    hemisphere version.

    mris_left_right_register was performed to get lh.sphere.left_right
    and lh.sphere.left_right but I don't know how to use this for
    the mris_apply_reg command.

    Thanks in advance for your answer.

    Alexandre


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