Dear All, I am in the process of getting a powerful linux laptop to run Freesurfer. Can I run Freesurfer on a 11.10 version of Ubuntu 64 bit ? Are there any incompatibilities between the latest Freesurfer version and Ubuntu? Is there any configuration issues and solution particular to my situation that you can comment on? Thank you, Octavian.mhtml:{57E897FE-D0ED-4693-ACA6-A3EF0E2D03DA}mid://00000000/!x-usc:mailto:Octavian.octavian.lie@gmail.com
I second Octavian's question. Does anyone know how FreeSurfer runs on Ubuntu 11.10?
Thank you, Jesse
On Thu, Jan 19, 2012 at 9:04 PM, octavian lie octavian.lie@gmail.comwrote:
Dear All, I am in the process of getting a powerful linux laptop to run Freesurfer. Can I run Freesurfer on a 11.10 version of Ubuntu 64 bit ? Are there any incompatibilities between the latest Freesurfer version and Ubuntu? Is there any configuration issues and solution particular to my situation that you can comment on? Thank you, Octavian.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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On 01/22/12 22:21, Jesse Bledsoe wrote:
I second Octavian's question. Does anyone know how FreeSurfer runs on Ubuntu 11.10?
Works fine on both 11.04 and 11.10.
Best
Works fine
Verstuurd vanaf mijn iPhone
Op 23 jan. 2012 om 05:18 heeft Rudolph Pienaar rudolph@nmr.mgh.harvard.edu het volgende geschreven:
On 01/22/12 22:21, Jesse Bledsoe wrote:
I second Octavian's question. Does anyone know how FreeSurfer runs on Ubuntu 11.10?
Works fine on both 11.04 and 11.10.
Best
-- Rudolph Pienaar, M.Eng, D.Eng / email: rudolph@nmr.mgh.harvard.edu MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging 149 (2301) 13th Street, Charlestown, MA 02129 USA
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Thank you for the info, can you share what freesurfer version you have that happens to work well with ubuntu 11.10? Octavian
On 1/23/12 08:17 , octavian lie wrote:
Thank you for the info, can you share what freesurfer version you have that happens to work well with ubuntu 11.10? Octavian
The lastest stable works... as well as the development versions. There is sometimes a library version error which is easily fixed with a soft symlink: i.e. an app like 'mri_info' might complain on Ubuntu that "libxml2.so.1" not found since on Ubuntu the library is "libxml2.so.2". In such a case, it's easily fixed by:
cd /usr/lib sudo ln -s libxml.so.2 libxml.so.1
(And this is just an example. I don't remember which odd library might have had issues -- it wasn't libxml, but the general fix is the same).
Best -=R
freesurfer@nmr.mgh.harvard.edu
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Jesse Bledsoe -
Martijn Steenwijk -
octavian lie -
Rudolph Pienaar