Hi, After running QDEC, I would like to output in a table the thickness values within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table?
Thanks, Antonella
________________________________ From: Douglas N Greve greve@nmr.mgh.harvard.edu To: Bruce Fischl fischl@nmr.mgh.harvard.edu Cc: carolina.mr carolina.mr@uol.com.br; David Kennedy dave@nmr.mgh.harvard.edu; freesurfer@nmr.mgh.harvard.edu Sent: Friday, September 23, 2011 11:38 AM Subject: Re: [Freesurfer] QDEC results and stats
The "value" is the dependent variable (eg, thickness). doug
Bruce Fischl wrote:
Hi Carolina
I'll leave the 2nd question for Doug and
Nick. The first one, I think
you mean "ventral DC", which is short for "ventral diencephalon". It's a grab bag of a bunch of stuff that we can't resolve. You would need to check with someone like Dave Kennedy (ccd) to get the exact description.
cheers Bruce
On Fri, 23 Sep 2011, carolina.mr wrote:
Hello, all,
I have 2 questions:
- Does anybody know which structure is represented or correspond to
"left ventral IDC" in aseg segmentation?
- In QDEC analysis, when we obtatin the significant clusters and see
the linear regression or correlation curve, what does it mean the "value" of the curve? Is it the regression coeficient? The level of correlation? How shall I describe it?
Thank you,
Carolina
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hello Freesurfer's
I want to set up (thanks to Nick's advice) a model with 2 covariates and one nuisance variable in QDEC. I am using the Freesurfer Version 4.5 but the QDEC version I am running is 1.2. I did not see any option for nuisance variables in it? I therefore went to this link ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/ and downloaded the qdec.bin and mri_glmfit into the /usr/local/freesurfer/bin directory after backing up the originals.
I gave permissions to the user and then tried running qdec and I get this error: qdec.bin: error while loading shared libraries: libvtkverdict.so.5.6: cannot open shared object file: No such file or directory
Did I download the wrong file? (I downloaded from the linux_centos4_x86_64)
Thanks for any help!
Manish
Hello Freesurfer's,
I posted this last week. Does someone have any insights? Kindly advise!
Manish ------ Forwarded Message From: <Dalwani>, Manish Dalwani manish.dalwani@ucdenver.edu Date: Fri, 23 Sep 2011 14:25:42 -0600 To: freesurfer@nmr.mgh.harvard.edu Conversation: QDEC analyses Subject: QDEC analyses
Hello Freesurfer's
I want to set up (thanks to Nick's advice) a model with 2 covariates and one nuisance variable in QDEC. I am using the Freesurfer Version 4.5 but the QDEC version I am running is 1.2. I did not see any option for nuisance variables in it? I therefore went to this link ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/ and downloaded the qdec.bin and mri_glmfit into the /usr/local/freesurfer/bin directory after backing up the originals.
I gave permissions to the user and then tried running qdec and I get this error: qdec.bin: error while loading shared libraries: libvtkverdict.so.5.6: cannot open shared object file: No such file or directory
Did I download the wrong file? (I downloaded from the linux_centos4_x86_64)
Thanks for any help!
Manish ------ End of Forwarded Message
the easiest option is to download v5.1 and use the qdec in it. it will include the necessary libs that qdec is built against.
n.
On Tue, 2011-09-27 at 11:13 -0600, Dalwani, Manish wrote:
Hello Freesurfer’s,
I posted this last week. Does someone have any insights? Kindly advise!
Manish ------ Forwarded Message From: <Dalwani>, Manish Dalwani manish.dalwani@ucdenver.edu Date: Fri, 23 Sep 2011 14:25:42 -0600 To: freesurfer@nmr.mgh.harvard.edu Conversation: QDEC analyses Subject: QDEC analyses
Hello Freesurfer’s
I want to set up (thanks to Nick’s advice) a model with 2 covariates and one nuisance variable in QDEC. I am using the Freesurfer Version 4.5 but the QDEC version I am running is 1.2. I did not see any option for nuisance variables in it? I therefore went to this link ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/ and downloaded the qdec.bin and mri_glmfit into the /usr/local/freesurfer/bin directory after backing up the originals.
I gave permissions to the user and then tried running qdec and I get this error: qdec.bin: error while loading shared libraries: libvtkverdict.so.5.6: cannot open shared object file: No such file or directory
Did I download the wrong file? (I downloaded from the linux_centos4_x86_64)
Thanks for any help!
Manish ------ End of Forwarded Message _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thanks Nick, would that affect any of the files (or work) we have done on Freesurfer version 4.5? Is there a way to use both seperately on the same machine?
Best, Manish
On 9/27/11 12:18 PM, "Nick Schmansky" nicks@nmr.mgh.harvard.edu wrote:
the easiest option is to download v5.1 and use the qdec in it. it will include the necessary libs that qdec is built against.
n.
On Tue, 2011-09-27 at 11:13 -0600, Dalwani, Manish wrote:
Hello Freesurfer's,
I posted this last week. Does someone have any insights? Kindly advise!
Manish ------ Forwarded Message From: <Dalwani>, Manish Dalwani manish.dalwani@ucdenver.edu Date: Fri, 23 Sep 2011 14:25:42 -0600 To: freesurfer@nmr.mgh.harvard.edu Conversation: QDEC analyses Subject: QDEC analyses
Hello Freesurfer's
I want to set up (thanks to Nick's advice) a model with 2 covariates and one nuisance variable in QDEC. I am using the Freesurfer Version 4.5 but the QDEC version I am running is 1.2. I did not see any option for nuisance variables in it? I therefore went to this link ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/ and downloaded the qdec.bin and mri_glmfit into the /usr/local/freesurfer/bin directory after backing up the originals.
I gave permissions to the user and then tried running qdec and I get this error: qdec.bin: error while loading shared libraries: libvtkverdict.so.5.6: cannot open shared object file: No such file or directory
Did I download the wrong file? (I downloaded from the linux_centos4_x86_64)
Thanks for any help!
Manish ------ End of Forwarded Message _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
its possible to have different versions installed, just install it in another directory.
qdec will not change any of the existing data processed with another version.
n.
On Tue, 2011-09-27 at 14:05 -0600, Dalwani, Manish wrote:
Thanks Nick, would that affect any of the files (or work) we have done on Freesurfer version 4.5? Is there a way to use both seperately on the same machine?
Best, Manish
On 9/27/11 12:18 PM, "Nick Schmansky" nicks@nmr.mgh.harvard.edu wrote:
the easiest option is to download v5.1 and use the qdec in it. it will include the necessary libs that qdec is built against. n. On Tue, 2011-09-27 at 11:13 -0600, Dalwani, Manish wrote: > Hello Freesurfer’s, > > I posted this last week. Does someone have any insights? Kindly > advise! > > Manish > ------ Forwarded Message > From: <Dalwani>, Manish Dalwani <manish.dalwani@ucdenver.edu> > Date: Fri, 23 Sep 2011 14:25:42 -0600 > To: <freesurfer@nmr.mgh.harvard.edu> > Conversation: QDEC analyses > Subject: QDEC analyses > > Hello Freesurfer’s > > I want to set up (thanks to Nick’s advice) a model with 2 covariates > and one nuisance variable in QDEC. I am using the Freesurfer Version > 4.5 but the QDEC version I am running is 1.2. I did not see any option > for nuisance variables in it? I therefore went to this link > ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/ and > downloaded the qdec.bin and mri_glmfit into > the /usr/local/freesurfer/bin directory after backing up the > originals. > > I gave permissions to the user and then tried running qdec and I get > this error: > qdec.bin: error while loading shared libraries: libvtkverdict.so.5.6: > cannot open shared object file: No such file or directory > > Did I download the wrong file? (I downloaded from the > linux_centos4_x86_64) > > Thanks for any help! > > Manish > ------ End of Forwarded Message > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Ok thanks so much Nick!
On 9/27/11 2:08 PM, "Nick Schmansky" nicks@nmr.mgh.harvard.edu wrote:
its possible to have different versions installed, just install it in another directory.
qdec will not change any of the existing data processed with another version.
n.
On Tue, 2011-09-27 at 14:05 -0600, Dalwani, Manish wrote:
Thanks Nick, would that affect any of the files (or work) we have done on Freesurfer version 4.5? Is there a way to use both seperately on the same machine?
Best, Manish
On 9/27/11 12:18 PM, "Nick Schmansky" nicks@nmr.mgh.harvard.edu wrote:
the easiest option is to download v5.1 and use the qdec in it. it will include the necessary libs that qdec is built against. n. On Tue, 2011-09-27 at 11:13 -0600, Dalwani, Manish wrote: > Hello Freesurfer's, > > I posted this last week. Does someone have any insights? Kindly > advise! > > Manish > ------ Forwarded Message > From: <Dalwani>, Manish Dalwani <manish.dalwani@ucdenver.edu> > Date: Fri, 23 Sep 2011 14:25:42 -0600 > To: <freesurfer@nmr.mgh.harvard.edu> > Conversation: QDEC analyses > Subject: QDEC analyses > > Hello Freesurfer's > > I want to set up (thanks to Nick's advice) a model with 2 covariates > and one nuisance variable in QDEC. I am using the Freesurfer Version > 4.5 but the QDEC version I am running is 1.2. I did not see any option > for nuisance variables in it? I therefore went to this link > ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/ and > downloaded the qdec.bin and mri_glmfit into > the /usr/local/freesurfer/bin directory after backing up the > originals. > > I gave permissions to the user and then tried running qdec and I get > this error: > qdec.bin: error while loading shared libraries: libvtkverdict.so.5.6: > cannot open shared object file: No such file or directory > > Did I download the wrong file? (I downloaded from the > linux_centos4_x86_64) > > Thanks for any help! > > Manish > ------ End of Forwarded Message > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Hi, After running QDEC, I would like to output in a table the average value for the cortical thickness within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table ?
Thanks, Antonella
Will this work (this is from running mri_glmfit-sim --help, which has even more info):
csdbase.y.ocn.dat - this is a summary of the input (y) over each cluster. It has a column for each cluster. Each row is a subject. The value is the average of the input (y) in each cluster. This is a simple text file.
Antonella Kis wrote:
Hi, After running QDEC, I would like to output in a table the average value for the cortical thickness within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table ? Thanks, Antonella
Dear Doug,
I got this results while I was running the GLM simulation but I wonder if there is a way to get under QDEC (when I run QDEC from the interface) and I am using the FDR and Monte Carlo simulation. In this case I am not getting any output as in GLM from which I got the csdbase.y.ocn.dat. While using QDEC I can getthe thickness on the graph which is one point in the cluster, not the mean of the cluster. Is there a way to change the cluster into binary data (I am not sure) and then extract the mean thickness of that cluster or how I can get under QDEC the average thickness of the clusters?
Many thanks, Antonella
________________________________ From: Douglas N Greve greve@nmr.mgh.harvard.edu To: Antonella Kis atorok9@yahoo.com Cc: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Sent: Monday, September 26, 2011 10:23 AM Subject: Re: [Freesurfer] QDEC stats table output
Will this work (this is from running mri_glmfit-sim --help, which has even more info):
csdbase.y.ocn.dat - this is a summary of the input (y) over each cluster. It has a column for each cluster. Each row is a subject. The value is the average of the input (y) in each cluster. This is a simple text file.
Antonella Kis wrote:
Hi, After running QDEC, I would like to output in a table the average value for the cortical thickness within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table ? Thanks, Antonella
Dear Doug,
I got this results while I was running the GLM simulation but I wonder if there is a way to get under QDEC (when I run QDEC from the interface) and I am using the FDR and Monte Carlo simulation. In this case I am not getting any output as in GLM from which I got the csdbase.y.ocn.dat. While using QDEC I can getthe thickness on the graph which is one point in the cluster, not the mean of the cluster. Is there a way to change the cluster into binary data (I am not sure) and then extract the mean thickness of that cluster or how I can get under QDEC the average thickness of the clusters?
Many thanks, Antonella
________________________________ From: Douglas N Greve greve@nmr.mgh.harvard.edu To: Antonella Kis atorok9@yahoo.com Cc: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Sent: Monday, September 26, 2011 10:23 AM Subject: Re: [Freesurfer] QDEC stats table output
Will this work (this is from running mri_glmfit-sim --help, which has even more info):
csdbase.y.ocn.dat - this is a summary of the input (y) over each cluster. It has a column for each cluster. Each row is a subject. The value is the average of the input (y) in each cluster. This is a simple text file.
Antonella Kis wrote:
Hi, After running QDEC, I would like to output in a table the average value for the cortical thickness within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table ? Thanks, Antonella
You can run mri_glmfit-sim on the QDEC output directory. Or you can run the simulation from within QDEC. Both will give you this output file. doug
Antonella Kis wrote:
Dear Doug,
I got this results while I was running the GLM simulation but I wonder if there is a way to get under QDEC (when I run QDEC from the interface) and I am using the FDR and Monte Carlo simulation. In this case I am not getting any output as in GLM from which I got the csdbase.y.ocn.dat. While using QDEC I can get the thickness on the graph which is one point in the cluster, not the mean of the cluster. Is there a way to change the cluster into binary data (I am not sure) and then extract the mean thickness of that cluster or how I can get under QDEC the average thickness of the clusters?
Many thanks, Antonella
*From:* Douglas N Greve greve@nmr.mgh.harvard.edu *To:* Antonella Kis atorok9@yahoo.com *Cc:* "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu *Sent:* Monday, September 26, 2011 10:23 AM *Subject:* Re: [Freesurfer] QDEC stats table output
Will this work (this is from running mri_glmfit-sim --help, which has even more info):
csdbase.y.ocn.dat - this is a summary of the input (y) over each cluster. It has a column for each cluster. Each row is a subject. The value is the average of the input (y) in each cluster. This is a simple text file.
Antonella Kis wrote:
Hi, After running QDEC, I would like to output in a table the average value for the cortical thickness within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table ? Thanks, Antonella
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu mailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Dear Doug,
I don't know if I am doing something wrong but when I run the simulation under QDEC I am not getting the csdbase.y.ocn.dat file. The only files that I get under after running the simulation under QDEC are: mc-z.abs.th20.sig.cluster.summary, mc-z.abs.th20.sig.ocn.annot,mc-z.abs.th20.sig.ocn.mgh while QDEC output file are: Contrasts, lh_Avg-Intercept-thickness, lh_Avg-thickness-Age-Cor. In the last two files I have sig.mgh so I am not sure on what file should I run the simulation and why Monte Carlo does not give me as an output the file I want as a .dat. Because I want to do a study and eliminate age, I choose as a Continuous Variable: Age and as a Discrete Variable: Class and I highlight them in QDEC in the Design window. What if I my discrete variable is not highlighted? Also, Age is coming under Nuisance Factors but do I need to highlight this?
Thank you very much for your help. Antonella
________________________________ From: Douglas N Greve greve@nmr.mgh.harvard.edu To: Antonella Kis atorok9@yahoo.com Cc: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Sent: Monday, September 26, 2011 11:19 AM Subject: Re: [Freesurfer] QDEC stats table output
You can run mri_glmfit-sim on the QDEC output directory. Or you can run the simulation from within QDEC. Both will give you this output file. doug
Antonella Kis wrote:
Dear Doug,
I got this results while I was running the GLM simulation but I wonder if there is a way to get under QDEC (when I run QDEC from the interface) and I am using the FDR and Monte Carlo simulation. In this case I am not getting any output as in GLM from which I got the csdbase.y.ocn.dat. While using QDEC I can get the thickness on the graph which is one point in the cluster, not the mean of the cluster. Is there a way to change the cluster into binary data (I am not sure) and then extract the mean thickness of that cluster or how I can get under QDEC the average thickness of the clusters?
Many thanks, Antonella
*From:* Douglas N Greve greve@nmr.mgh.harvard.edu *To:* Antonella Kis atorok9@yahoo.com *Cc:* "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu *Sent:* Monday, September 26, 2011 10:23 AM *Subject:* Re: [Freesurfer] QDEC stats table output
Will this work (this is from running mri_glmfit-sim --help, which has even more info):
csdbase.y.ocn.dat - this is a summary of the input (y) over each cluster. It has a column for each cluster. Each row is a subject. The value is the average of the input (y) in each cluster. This is a simple text file.
Antonella Kis wrote:
Hi, After running QDEC, I would like to output in a table the average value for the cortical thickness within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table ? Thanks, Antonella
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu mailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Dear Doug,
I don't know if I am doing something wrong but when I run the simulation under QDEC I am not getting the csdbase.y.ocn.dat file. The only files that I get under after running the simulation under QDEC are: mc-z.abs.th20.sig.cluster.summary, mc-z.abs.th20.sig.ocn.annot,mc-z.abs.th20.sig.ocn.mgh while QDEC output file are: Contrasts, lh_Avg-Intercept-thickness, lh_Avg-thickness-Age-Cor. In the last two files I have sig.mgh so I am not sure on what file should I run the simulation and why Monte Carlo does not give me as an output the file I want as a .dat. Because I want to do a study and eliminate age, I choose as a Continuous Variable: Age and as a Discrete Variable: Class and I highlight them in QDEC in the Design window. What if I my discrete variable is not highlighted? Also, Age is coming under Nuisance Factors but do I need to highlight this?
Thank you very much for your help. Antonella
________________________________ From: Douglas N Greve greve@nmr.mgh.harvard.edu To: Antonella Kis atorok9@yahoo.com Cc: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Sent: Monday, September 26, 2011 11:19 AM Subject: Re: [Freesurfer] QDEC stats table output
You can run mri_glmfit-sim on the QDEC output directory. Or you can run the simulation from within QDEC. Both will give you this output file. doug
Antonella Kis wrote:
Dear Doug,
I got this results while I was running the GLM simulation but I wonder if there is a way to get under QDEC (when I run QDEC from the interface) and I am using the FDR and Monte Carlo simulation. In this case I am not getting any output as in GLM from which I got the csdbase.y.ocn.dat. While using QDEC I can get the thickness on the graph which is one point in the cluster, not the mean of the cluster. Is there a way to change the cluster into binary data (I am not sure) and then extract the mean thickness of that cluster or how I
can get
under QDEC the average thickness of the clusters?
Many thanks, Antonella
*From:* Douglas N Greve greve@nmr.mgh.harvard.edu *To:* Antonella Kis atorok9@yahoo.com *Cc:* "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu *Sent:* Monday, September 26, 2011 10:23 AM *Subject:* Re: [Freesurfer] QDEC stats table output
Will this work (this is from running mri_glmfit-sim --help, which
has
even more info):
csdbase.y.ocn.dat - this is a summary of the input (y) over each cluster. It has a column for each cluster. Each row is a subject. The value is the average of the input (y) in each cluster. This is a simple text file.
Antonella Kis wrote:
Hi, After running QDEC, I would like to output in a table the average value for the cortical thickness within each clusters. I know this is a dependent variable and I can see the values on the plot but is there a way that I can get this values in a table ? Thanks, Antonella
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu mailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu