ok thanks a lot ! do you know when it will be fixed in the recon-all as well ?

Cheers, Pierre

On Fri, Aug 19, 2016 at 7:45 PM, Douglas Greve greve@nmr.mgh.harvard.edu wrote:

The error is in recon-all. If you want to fix this one outside of recon-all you can run cd $SUBJECTS_DIR/subject/mri mri_aparc2aseg --s subject --volmask --aseg aseg.presurf.hypos --a2009s

On 8/19/16 11:08 AM, pierre deman wrote:

Hello,

I am looking at the destrieux atlas generated by recon-all (I use the freesurfer dev version), the file aparc.a2009+aseg.mgz), and sometimes the value of a voxel doesn't exist in the FreesurferColorLut. I have quite a lot of values between 2036 and 2100 (2038, 2074, 2075 for example) and I don't find these values in the FreeSurferColorLut.

Is that normal ? What do they correspond at ?

Regards, Pierre

-- DEMAN Pierre Mobile : +33 7 82 57 80 94

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