Hello all,
I wanted to know where the mritotal.log file is created.I checked the /scripts directory but couldnt find it there. I'd like to have a look at the Final objective function value for the subjects I'm running.
Thanks in advance
Chacko Cherian.
not sure where it is, but don't use that to assess how good the talairach registration is. You have to visually assess it.
Bruce
On Wed, 30 Aug 2006, Chacko Cherian wrote:
Hello all,
I wanted to know where the mritotal.log file is created.I checked the /scripts directory but couldnt find it there. I'd like to have a look at the Final objective function value for the subjects I'm running.
Thanks in advance
Chacko Cherian.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The "Final objective function value" produced by mritotal is found in the <subj>/mri/transforms/talairach.log file, but its not the primary means of determining alignment. See:
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Talairach
On Wed, 2006-08-30 at 16:37 -0700, Chacko Cherian wrote:
Hello all,
I wanted to know where the mritotal.log file is created.I checked the /scripts directory but couldnt find it there. I'd like to have a look at the Final objective function value for the subjects I'm running.
Thanks in advance
Chacko Cherian.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Bruce Fischl -
Chacko Cherian -
Nick Schmansky