I believe the cortical thickness measures are taken slightly differently. This paper might offer some insights.

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408913/

Trisanna

-- Ph.D. Candidate McGill University Integrated Program in Neuroscience Psychology

On Fri, Jul 14, 2017 at 8:29 AM, Antonin Skoch ansk@ikem.cz wrote:

Dear Zhiquiang,

as a regular user of FreeSurfer I am wondering, what is the advantage of using Civet instead of FreeSurfer?

Are there some functionalities in Civet which are not available in FreeSurfer? Or does Civet offer better performance/accuracy/precision in estimation of surface models for some situations/datasets?

Antonin Skoch

Hello FreeSurfer Developers,

I am attempting to switch the Desikan-Killiany atlas of FreeSurfer to Civet. But I have no idea to solve the problem. Would you like to give me some suggestions or some detailed steps to help me accomplish the tasks ?

Best wishes, Zhiqiang Sha

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