External Email - Use Caution
Hi list,
I tried to run some longitudinal data with two time points with the latest version Freesurfer (7.1.0) on the Ubantu 16 system. "recon-all -base" with two time points need 5 hours to complete on my PC, and recon-all -long need 2 hours. I try to use the command "recon-all -long pre009 sub009base -parallel" and it went with errors. I was wondering if I can use other flags to speed up the recon-all -base and recon-all -long for each terminal.
Thank you Molly
Rather than -parrallel, use -threads to indicate the number of processors to use
On 8/5/20 10:47 AM, Yang Molly wrote:
External Email - Use Caution
Hi list,
I tried to run some longitudinal data with two time points with the latest version Freesurfer (7.1.0) on the Ubantu 16 system. "recon-all -base" with two time points need 5 hours to complete on my PC, and recon-all -long need 2 hours. I try to use the command "recon-all -long pre009 sub009base -parallel" and it went with errors. I was wondering if I can use other flags to speed up the recon-all -base and recon-all -long for each terminal.
Thank you Molly
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Yang Molly