*Can you send the terminal output for recon-all -s subjid -qcache*

On 09/01/2016 02:53 PM, Jana Dinges wrote:

Dear freesurfer community, we are conducting cortical-thickness analysis using freesurfer-5.3.0 and have been experiencing some problems with the final analysis steps. We are using the qdec. Uploading of the data table has been successful. When we try to use the “Analyze” command (design) in the qdec, we get the following error message: Error in Analyze: Couldn’t open file /data/projects/oertelmatura/Neurodegeneration_MCI/AK38/surf/lh.thickness.fwhm10.fsaverage.mgz or mgh Obviously, the file was not created during preprocessing*although we ran (recon-all -s subjid -qcache)* for every subject. We wonder, how to create dir/lh.thickness.fwhm10.fsaverage.mgh and would be very grateful for your comments. Yours sincerely, JanaXXX

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