It's hard to fully diagnose, without the command you called, but it looks like you have your SUBJECTS_DIR and SUBJECT variable wrong, and perhaps command syntax. Take another look at your command.

hth d

On Thu, Jul 7, 2016 at 2:59 AM, stdp82@virgilio.it wrote:

Hi list,

after update with El Capitain, recon-all -all produce the error reported below.

Thanks

srclabel = /Applications/freesurfer/subjects/subject_prova/subj/fsaverage/label/lh.BA1.label

srcsubject = fsaverage

trgsubject = SUBJECTS_DIR

trglabel = ./lh.BA1.label

regmethod = surface

srchemi = lh

trghemi = lh

trgsurface = white

srcsurfreg = sphere.reg

trgsurfreg = sphere.reg

usehash = 1

Use ProjAbs = 0, 0

Use ProjFrac = 0, 0

DoPaint 0

SUBJECTS_DIR /Applications/freesurfer/subjects/subject_prova/subj

FREESURFER_HOME /Applications/freesurfer

Loading source label.

No such file or directory

ERROR reading /Applications/freesurfer/subjects/subject_prova/Control89/fsaverage/label/lh.BA1.label

Darwin iMac-di-Stefano.local 15.5.0 Darwin Kernel Version 15.5.0: root:xnu-3248.50.21~8/RELEASE_X86_64 x86_64

recon-all -s SUBJECTS_DIR exited with ERRORS

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