Hello FreeSurfers,
Wish you a great summer time!
I’m running recon-all on DICOM images of a healthy control, and it's giving me an error. I have attached the log file; I’m running FreeSurfer on a Mac computer and the version I’m using is: freesurfer-Darwin-lion-dev-20140701.
I would really appreciate your help.
Best, Emad
Emad Ahmadi, MD ----------------------------------------------- Postdoc Research Fellow Department of Radiology Massachusetts General Hospital Harvard Medical School
25 New Chardon Street, Suite 400 Boston, MA 02114 Tel: 617 726 5237 Email: emad@nmr.mgh.harvard.edu
hmmm, hard to say. Is it possible that you ran out of memory? Maybe something else was running on the machine? Try rerunning and see if it is ok, and also monitor memory usage. It died right in the middle of mri_ca_label which I can't remember seeing before
On Mon, 7 Jul 2014, Emad Ahmadi wrote:
Hello FreeSurfers,
Wish you a great summer time!
I’m running recon-all on DICOM images of a healthy control, and it's giving me an error. I have attached the log file; I’m running FreeSurfer on a Mac computer and the version I’m using is: freesurfer-Darwin-lion-dev-20140701.
I would really appreciate your help.
Best, Emad
Emad Ahmadi, MD
Postdoc Research Fellow Department of Radiology Massachusetts General Hospital Harvard Medical School
25 New Chardon Street, Suite 400 Boston, MA 02114 Tel: 617 726 5237 Email: emad@nmr.mgh.harvard.edu
Thank you very much, Bruce! I ran it again and this time, it didn’t give me error.
Yours, Emad
On Jul 7, 2014, at 12:30 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
hmmm, hard to say. Is it possible that you ran out of memory? Maybe something else was running on the machine? Try rerunning and see if it is ok, and also monitor memory usage. It died right in the middle of mri_ca_label which I can't remember seeing before
On Mon, 7 Jul 2014, Emad Ahmadi wrote:
Hello FreeSurfers,
Wish you a great summer time!
I’m running recon-all on DICOM images of a healthy control, and it's giving me an error. I have attached the log file; I’m running FreeSurfer on a Mac computer and the version I’m using is: freesurfer-Darwin-lion-dev-20140701.
I would really appreciate your help.
Best, Emad
Emad Ahmadi, MD
Postdoc Research Fellow Department of Radiology Massachusetts General Hospital Harvard Medical School
25 New Chardon Street, Suite 400 Boston, MA 02114 Tel: 617 726 5237 Email: emad@nmr.mgh.harvard.edu
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
you probably ran out of memory then. Glad it worked out Bruce On Tue, 8 Jul 2014, Emad Ahmadi wrote:
Thank you very much, Bruce! I ran it again and this time, it didn’t give me error.
Yours, Emad
On Jul 7, 2014, at 12:30 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
hmmm, hard to say. Is it possible that you ran out of memory? Maybe something else was running on the machine? Try rerunning and see if it is ok, and also monitor memory usage. It died right in the middle of mri_ca_label which I can't remember seeing before
On Mon, 7 Jul 2014, Emad Ahmadi wrote:
Hello FreeSurfers,
Wish you a great summer time!
I’m running recon-all on DICOM images of a healthy control, and it's giving me an error. I have attached the log file; I’m running FreeSurfer on a Mac computer and the version I’m using is: freesurfer-Darwin-lion-dev-20140701.
I would really appreciate your help.
Best, Emad
Emad Ahmadi, MD
Postdoc Research Fellow Department of Radiology Massachusetts General Hospital Harvard Medical School
25 New Chardon Street, Suite 400 Boston, MA 02114 Tel: 617 726 5237 Email: emad@nmr.mgh.harvard.edu
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Bruce Fischl -
Emad Ahmadi