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Hi Bruce,
Thanks a lot, here is the figure. We want to know the annotation of the red cluster. When we check the cache.th30.pos.sig.culster.summary, we got this cluster info. MNIX -8.8, MNIY -89.2, MNIZ 21.4
What are these coordinates? are they in MNI space?
Cheers, Jahanvi
Date: Thu, 2 Aug 2018 10:23:02 -0400 (EDT) From: Bruce Fischl fischl@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Annotation question in freesurfer To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Message-ID: alpine.LRH.2.20.1808021022090.1865@gate.nmr.mgh.harvard.edu Content-Type: text/plain; charset="utf-8" Hi Jahanvi did you mean to attach a figure? If you did it did not make it. Definitely
look at the annotation on the surface (inflated probably) if you want to judge its accuracy cheers Bruce On Thu, 2 Aug 2018, jahanvi patel wrote:
????????External Email - Use Caution????????
Dear List,
We have a question about the annotation of this MNI coordinate (-8.8,
-89.2, 21.4).
Freesurfer's report summary showed it is --?left superior parietal
lobule, while we see from the
figure it seems not very much correct. It seems more occipital cortex.
Is there a chance to validate
the annotation if possible?
Best regards, Jahanvi
yes, I believe so. Where did the red overlay come from? On Thu, 2 Aug 2018, jahanvi patel wrote:
External Email - Use Caution
Hi Bruce,
Thanks a lot, here is the figure. We want to know the annotation of the red cluster. When we check the cache.th30.pos.sig.culster.summary, we got this cluster info. MNIX -8.8, MNIY -89.2, MNIZ 21.4
What are these coordinates? are they in MNI space?
Cheers, Jahanvi
Date: Thu, 2 Aug 2018 10:23:02 -0400 (EDT) From: Bruce Fischl fischl@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Annotation question in freesurfer To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Message-ID: alpine.LRH.2.20.1808021022090.1865@gate.nmr.mgh.harvard.edu Content-Type: text/plain; charset="utf-8" Hi Jahanvi did you mean to attach a figure? If you did it did not make it. Definitely look at the annotation on the surface (inflated probably) if you want to judge its accuracy cheers Bruce On Thu, 2 Aug 2018, jahanvi patel wrote: > > ????????External Email - Use Caution???????? > > Dear List, > > We have a question about the annotation of this MNI coordinate (-8.8, -89.2, 21.4). > Freesurfer's report summary showed it is --?left superior parietal lobule, while we see from the > figure it seems not very much correct. It seems more occipital cortex. Is there a chance to validate > the annotation if possible? > > Best regards, > Jahanvi >
>
freesurfer@nmr.mgh.harvard.edu