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I fix it by adding --id 'segmentation id' to mri_segstats. Thanx Douglas.

Le mer. 10 août 2022 à 03:51, Douglas N. Greve dgreve@mgh.harvard.edu a écrit :

Can you send the terminal output and the petsuv.segstats.dat? How have you verified that the registration is correct? What version of FS are you running?

On 8/5/2022 4:44 PM, Bouchra Guelib wrote:

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I want to segment registered PET to T1 MRI to 45 subcortical regions as the regions in aseg.stats of MRI. I used mri_segstats --seg MRI-floder/mri/aparc+aseg.mgz --reg Pet2T1.register.dof12.lta --sum petsuv.segstats.dat --i PET-SPM.mgh --ctab-default into petsuv.segstats.dat, I found only 40 regions, not as aseg.stats what should I change in my commend?

-- *GUELIB Bouchra: *Ph.D. student *Lire *Laboratory University: Constantine 2-Abdelhamid Mehri- *Algeria * Alternative email: Guelibbouchra@gmail.com

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