I am wondering if there is a similar function as aseg2feat (which maps the automatic segmentations from Freesurfer to FSL FEAT functional space) for the use in SPM functional analysis. This tool poses to be very useful in creating ROI masks, however, we are using SPM for functional analysis rather than FSL FEAT.
Thanks,
Vanessa Palzes Research Assistant Brain Imaging & EEG Lab San Francisco VA Medical Center 4150 Clement Street San Francisco, CA 94121 Tel: 415-221-4810 ext. 6155
There's nothing explicit, but it's not hard to do. You need to analyze your SPM data in the native functional space. Then register the functional to the anatomical using bbregister. Then map the segmentations into the functional space with mri_label2vol.
doug
On 4/5/11 3:04 PM, Palzes, Vanessa wrote:
I am wondering if there is a similar function as aseg2feat (which maps the automatic segmentations from Freesurfer to FSL FEAT functional space) for the use in SPM functional analysis. This tool poses to be very useful in creating ROI masks, however, we are using SPM for functional analysis rather than FSL FEAT.
Thanks,
Vanessa Palzes Research Assistant Brain Imaging& EEG Lab San Francisco VA Medical Center 4150 Clement Street San Francisco, CA 94121 Tel: 415-221-4810 ext. 6155
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