Hi All,
I have a few scans that were done with a field of view of 200. I was wondering how freesurfer extrapolates that to a 256 by 256 by 256 matrix.
Thanks, Trina
it depends on the voxel dimensions. If they are 1x1x1 we just embed it, otherwise we use trilinear interpolation.
cheers, Bruce
On Tue, 1 May 2007, Trina Kok wrote:
Hi All,
I have a few scans that were done with a field of view of 200. I was wondering how freesurfer extrapolates that to a 256 by 256 by 256 matrix.
Thanks, Trina _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi,
The voxel dimensions are indeed 1x1x1. Does embedding mean that the 256x256 matrix is form from zero-padding?
Thanks! Trina
Quoting Bruce Fischl fischl@nmr.mgh.harvard.edu:
it depends on the voxel dimensions. If they are 1x1x1 we just embed it, otherwise we use trilinear interpolation.
cheers, Bruce
On Tue, 1 May 2007, Trina Kok wrote:
Hi All,
I have a few scans that were done with a field of view of 200. I was wondering how freesurfer extrapolates that to a 256 by 256 by 256 matrix.
Thanks, Trina _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
yes, it is zero padded. Note also that it is downsampled to be 8 bits/voxel from whatever it was.
On Tue, 1 May 2007, Trina Kok wrote:
Hi,
The voxel dimensions are indeed 1x1x1. Does embedding mean that the 256x256 matrix is form from zero-padding?
Thanks! Trina
Quoting Bruce Fischl fischl@nmr.mgh.harvard.edu:
it depends on the voxel dimensions. If they are 1x1x1 we just embed it, otherwise we use trilinear interpolation.
cheers, Bruce
On Tue, 1 May 2007, Trina Kok wrote:
Hi All,
I have a few scans that were done with a field of view of 200. I was wondering how freesurfer extrapolates that to a 256 by 256 by 256 matrix.
Thanks, Trina _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu