Dear FS experts
I want to perform a 2-sample test on my LGI data using qdec (whole brain analysis with potential covariates). I already ran the recon-all -s my_subject_id -qcache -measure pail_lgi command for each of the subjects and included pial_lgi as measure in the QDEC Design tab.
However, it is not clear to me how I need to create the qdec.table.dat file with the output from recon-all -s my_subject_id -qcache -measure pail_lgi. Do I need the lh/rh.pial_lgi.fsaverage.mgh files, and if yes, how can I extract the information from these files?
Many thanks for your help! Best wishes André
no, you just include demographics/diagnosis/etc in the qdec file. You should be able to select the dependent measure from the qdec control panel
On 01/23/2017 05:58 AM, André Schmidt wrote:
Dear FS experts
I want to perform a 2-sample test on my LGI data using qdec (whole brain analysis with potential covariates). I already ran the recon-all -s my_subject_id -qcache -measure pail_lgi command for each of the subjects and included pial_lgi as measure in the QDEC Design tab.
However, it is not clear to me how I need to create the qdec.table.dat file with the output from recon-all -s my_subject_id -qcache -measure pail_lgi. Do I need the lh/rh.pial_lgi.fsaverage.mgh files, and if yes, how can I extract the information from these files?
Many thanks for your help! Best wishes André
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