Hi Barnali,

what do you mean you "don't get to see the pial surface"? If you type:

tksurfer <subject> lh pial

does it not show the pial? If it finished autorecon3 it should have a pial surface for both hemis.

cheers Bruce

On Thu, 9 Jul 2009, Barnali Basu wrote:

Experts,

I have successfully run recon-all (all the 3 processes autorecon1,2 and 3) on a subject. When I see the surfaces on tksurfer, I dont get to see the pial surface.

I gather I could construct Pial surface by running autorecon2-pial. Would this affect in any way, since I have already finished autorecon3.

Do I have to run autorecon3 again ?

Any help would be appreciated

Thanks

Barnali