The processing of control points in volume/surface creation in mri_normalize, used by csurf and recon-all, is broken for certain types of data in the 20040218 release. Please download one of these updates if you are having trouble:
Darwin, 872KB: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/mri_normalize-20040311-Darwin.tar.gz
Linux, 1263KB: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/mri_normalize-20040311-Linux.tar.gz
To unpack, move the file you download to your freesurfer/ directory, cd there, and run "tar zxvf <filename>". It will install bin/<OS>/mri_normalize.
Hi Kevin
we've updated and changed stuff as you suggested and are now having lots of malfunctions - for instance, when I try to fill a new label, I get this error message:
Wrong # args: fill_flood_from_cursor dont_cross_boundary dont_cross_label dont_cross_cmid dont_cross_fthresh use_multiple_seeds action argument while executing "fill_flood_from_cursor $bNoBoundary $bNoLabel $bNoCmid $bNoFThresh" invoked from within ".wwCustomFillDlog.fwButtons.bw0 invoke" ("uplevel" body line 1) invoked from within "uplevel #0 [list $w invoke]" (procedure "tkButtonUp" line 7) invoked from within "tkButtonUp .wwCustomFillDlog.fwButtons.bw0 " (command bound to event)
Any idea what's up?
Thanks a lot for spending so much time on this,
best, Fred
Can you send me the .xdebug_tkmedit file that should be created in the same directory from which you ran tkmedit? Thanks.
On Thu, 11 Mar 2004, Frederic K. Dick wrote:
Hi Kevin
we've updated and changed stuff as you suggested and are now having lots of malfunctions - for instance, when I try to fill a new label, I get this error message:
Wrong # args: fill_flood_from_cursor dont_cross_boundary dont_cross_label dont_cross_cmid dont_cross_fthresh use_multiple_seeds action argument while executing "fill_flood_from_cursor $bNoBoundary $bNoLabel $bNoCmid $bNoFThresh" invoked from within ".wwCustomFillDlog.fwButtons.bw0 invoke" ("uplevel" body line 1) invoked from within "uplevel #0 [list $w invoke]" (procedure "tkButtonUp" line 7) invoked from within "tkButtonUp .wwCustomFillDlog.fwButtons.bw0 " (command bound to event)
Any idea what's up?
Thanks a lot for spending so much time on this,
best, Fred
freesurfer@nmr.mgh.harvard.edu
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Frederic K. Dick -
Kevin Teich