Dear Sir/Madame

I have written a script that calculates the cortical thickness for the whole hemisphere of the brain. I have some question if there are any ways to improve the script. I can quite easily write a script in Python that runs through the file I have created and append it to a coma separate file. What is the standard way to get average cortical thickness for the entire brain using ?h.cortex.label for serval different subjects?

Your faithfully

Knut J

#!/bin/sh subjects="" for filename in ${subjects}; do echo "subject ${filename}" mris_anatomical_stats -f rh_${filename}.txt ${filename} rh mris_anatomical_stats -f lh_${filename}.txt ${filename} lh done