Hi All,

OK. Installed those packages, but now I end up with this error:

checking for miopen in -lminc... no configure: error: FATAL: minc lib not found. Set LDFLAGS or --with-mni-dir.

I installed libminc2-1, libminc-dev and minc-tools, but I still get this error.

How do I proceed ?

Thanks!

-- Shay

2011/3/8 Pedro Paulo de Magalhães Oliveira Junior ppj@netfilter.com.br:

libnetcdf-dev or netcdf-dev will do the trick

On Tue, Mar 8, 2011 at 19:42, Shay Ohayon shay.ohayon@gmail.com wrote:

...

Hi All,

I am having some problems compiling freesurfer . I checked out the recent development version from the CVS, ran "setup_configure" successfully, but upon "./configure", I end up with the following annoying message:

checking for nccreate in -lnetcdf... no configure: error: FATAL: netcdf lib not found. Set LDFLAGS or --with-mni-dir.

I attempted to install the netcdf-bin and libnetcdf6 packages using Synaptic, but this did not seem to help. How do I continue from here?

-- Shay _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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