If this is your own machine, you can prepend “sudo” to the curl and tar commands, i.e.: cd /usr/local/apps/freesurfer sudo curl “http://www%E2%80%A6.. sudo tar xvf runtime2012b.tar.gz (it will require typing your password) Cheers, Eugenio

Juan Eugenio Iglesias ERC Senior Research Fellow Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/

On 10 Feb 2017, at 14:33, X K <bnucon@gmail.commailto:bnucon@gmail.com> wrote:

Hi Eugenio,

Thanks very much for your quick reply. I will try this method and come back soon. As it needs the root permissions, I was just wondering whether there would be other solutions. Thanks.

Best, Xiangzhen

On Fri, Feb 10, 2017 at 2:28 PM, Iglesias Gonzalez, Eugenio <e.iglesias@ucl.ac.ukmailto:e.iglesias@ucl.ac.uk> wrote: Dear Xiangzhen,

Have you tried following the instructions in the screen you sent us, to download the 2012b runtime? Did those commands lead to any errors?

Cheers,

/Eugenio

Juan Eugenio Iglesias ERC Senior Research Fellow Translational Imaging Group University College London http://www.jeiglesias.comhttp://www.jeiglesias.com/ http://cmictig.cs.ucl.ac.uk/

On 10 Feb 2017, at 09:17, X K <bnucon@gmail.commailto:bnucon@gmail.com> wrote:

Hi,

I'm working with the new version freesurfer 6.0. I found that recon-all with -hippocampal-subfields-T1 could not work well on my system. It reported that matlab 2012b cannot be found (Please see the attached for the error reported. ).

I have matlab 2013a and 2016a installed. But it seems that matlab 2012b is needed for running -hippocampal-subfields analysis. Anyone knows how to fix this issue? Or I have to install some matlab 2012b stuffs?

Thanks.

Best, Xiangzhen

<error.png> ​

-- ----------------------------------------------------------------------------------------- Kong Xiangzhen State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, China, 100875. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.

_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.

-- ----------------------------------------------------------------------------------------- Kong Xiangzhen State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing, China, 100875. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.