I've been getting this error message whenever I try to convert to .mgz format:
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mri_convert /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/average_bet.img /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/T2star.mgz reading from /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/average_bet.img... INFO: analyzeRead(): min = 0, max = 1000 TR=1000.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-0.027317, -0.986145, 0.163619) j_ras = (0.0506652, -0.164836, -0.985019) k_ras = (-0.998342, 0.018618, -0.054466) writing to /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/T2star.mgz...
gzip: stdout: Operation not permitted Broken pipe
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Is this a problem with mri_convert or am I doing something wrong that's preventing mri_convert from working properly? Thanks,
- Daniel
does the output dir exists? Do you have write permission?
On Mon, 21 Nov 2005, Daniel Goldman wrote:
I've been getting this error message whenever I try to convert to .mgz format:
mri_convert /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/average_bet.img /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/T2star.mgz reading from /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/average_bet.img... INFO: analyzeRead(): min = 0, max = 1000 TR=1000.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-0.027317, -0.986145, 0.163619) j_ras = (0.0506652, -0.164836, -0.985019) k_ras = (-0.998342, 0.018618, -0.054466) writing to /space/windu/4/users/recon/GORG25_recon/mri/32echo/magnitude/parameter_maps_average/T2star.mgz...
gzip: stdout: Operation not permitted Broken pipe
Is this a problem with mri_convert or am I doing something wrong that's preventing mri_convert from working properly? Thanks,
- Daniel
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