Hi,

looks like someone changed the default python to version 3, and you are still using a script written for python 2. I think Andrew updated this recently, so obtaining a newer version of the long_submit_jobs script from dev may fix this.

Best, Martin

On Tue, 2020-02-11 at 18:03 +0000, Huang, Yiting wrote:

Hi there,

I am trying to run some longitudinal data using freesurfer long_submit_jobs command on cluster. I have double checked my directory and files setup according to freesurfer longitudinal preprocessing wiki: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Scripts. And it seems there is no problem with my setup. However, when I run the command it keeps sending me error as below:

launchpad:yh917[21] long_submit_jobs --qdec long.qdec.table.dat -- cdir $PWD/../ --cross --base --long --pause 5 --max 200 --queue max100 File "/usr/local/freesurfer/stable6_0_0/bin/long_submit_jobs", line 94 print "job submission failed, maybe unknown host "+hostname ^ SyntaxError: Missing parentheses in call to 'print'. Did you mean print("job submission failed, maybe unknown host "+hostname)?

I can't figure out the reasons. Any help please?

Thanks, Yiting _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer