as long as the direction cosines are correct (which they will be if you start with the dicoms from the scanner) you should be fine

Bruce

On Thu, 31 Jan 2013, Anders Hougaard wrote:

Dear Freesurfers,

Do the anatomical input images to recon-all have to be in the same orientation (neurological/radiological) or is it ok as long as the orientation labels are correct?

All the best, Anders _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer