Dear Experts: I have worked my way through Tracula and things seem to work fine, but when I try to view my tractography outputs I get the following persistent error using freeview (copied below). I am using a Mac OS X 10.6.7. freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 -------- Could this be a similar problem as described below? http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg22110.html And if so, would this be a similar fix? Cheers, cat
Below is the error message I get: freeview -v $SUBJECTS_DIR/8000_tracula_out/8004_DTI/dmri/dtifit_FA.nii.gz \
$SUBJECTS_DIR/8000_tracula_out/8004_DTI/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ilf_AS_avg33_mni_flt/path.pd.nii.gz:colormap=jet:isosurface=0,0:color='Red' \
$SUBJECTS_DIR/8000_tracula_out/8004_DTI/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ilf_AS_avg33_mni_flt/path.pd.nii.gz:colormap=jet:isosurface=0,0:color='Red' & [1] 24711 fmris-Mac-Pro-2:8000_tracula fmri$ 2012-08-29 12:51:30.566 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.571 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.593 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.596 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.616 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.619 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.640 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.643 freeview.bin[24711:907] invalid drawable QObject::connect: Connecting from QAbstractButton::toggled(bool) to COMPAT slot (QGroupBox::setShown(bool)) QObject::connect: Connecting from QAbstractButton::toggled(bool) to COMPAT slot (QGroupBox::setShown(bool))
does freeview otherwise appear to be working? that is, does it crash?
the 'invalid drawable' messages can be ignored on the mac.
n.
On Wed, 2012-08-29 at 14:29 -0700, Cat Chong wrote:
Dear Experts: I have worked my way through Tracula and things seem to work fine, but when I try to view my tractography outputs I get the following persistent error using freeview (copied below). I am using a Mac OS X 10.6.7. freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 -------- Could this be a similar problem as described below? http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg22110.html And if so, would this be a similar fix? Cheers, cat
Below is the error message I get: freeview -v $SUBJECTS_DIR/8000_tracula_out/8004_DTI/dmri/dtifit_FA.nii.gz \
$SUBJECTS_DIR/8000_tracula_out/8004_DTI/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ilf_AS_avg33_mni_flt/path.pd.nii.gz:colormap=jet:isosurface=0,0:color='Red' \
$SUBJECTS_DIR/8000_tracula_out/8004_DTI/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ilf_AS_avg33_mni_flt/path.pd.nii.gz:colormap=jet:isosurface=0,0:color='Red' & [1] 24711 fmris-Mac-Pro-2:8000_tracula fmri$ 2012-08-29 12:51:30.566 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.571 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.593 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.596 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.616 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.619 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.640 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.643 freeview.bin[24711:907] invalid drawable QObject::connect: Connecting from QAbstractButton::toggled(bool) to COMPAT slot (QGroupBox::setShown(bool)) QObject::connect: Connecting from QAbstractButton::toggled(bool) to COMPAT slot (QGroupBox::setShown(bool)) _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thank you for the almost immediate reply. Yes, it seems to be otherwise working, cheers, Cat
________________________________ From: Nick Schmansky nicks@nmr.mgh.harvard.edu To: Cat Chong cavecreekcutter@yahoo.com Cc: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Sent: Wednesday, August 29, 2012 2:35 PM Subject: Re: [Freesurfer] freeview tracula error
does freeview otherwise appear to be working? that is, does it crash?
the 'invalid drawable' messages can be ignored on the mac.
n.
On Wed, 2012-08-29 at 14:29 -0700, Cat Chong wrote:
Dear Experts: I have worked my way through Tracula and things seem to work fine, but when I try to view my tractography outputs I get the following persistent error using freeview (copied below). I am using a Mac OS X 10.6.7. freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 -------- Could this be a similar problem as described below? http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg22110.html And if so, would this be a similar fix? Cheers, cat
Below is the error message I get: freeview -v $SUBJECTS_DIR/8000_tracula_out/8004_DTI/dmri/dtifit_FA.nii.gz \
$SUBJECTS_DIR/8000_tracula_out/8004_DTI/dpath/5cpts/priormni/seg14/initmni/regflt/lh.ilf_AS_avg33_mni_flt/path.pd.nii.gz:colormap=jet:isosurface=0,0:color='Red' \
$SUBJECTS_DIR/8000_tracula_out/8004_DTI/dpath/5cpts/priormni/seg14/initmni/regflt/rh.ilf_AS_avg33_mni_flt/path.pd.nii.gz:colormap=jet:isosurface=0,0:color='Red' & [1] 24711 fmris-Mac-Pro-2:8000_tracula fmri$ 2012-08-29 12:51:30.566 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.571 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.593 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.596 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.616 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.619 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.640 freeview.bin[24711:907] invalid drawable 2012-08-29 12:51:30.643 freeview.bin[24711:907] invalid drawable QObject::connect: Connecting from QAbstractButton::toggled(bool) to COMPAT slot (QGroupBox::setShown(bool)) QObject::connect: Connecting from QAbstractButton::toggled(bool) to COMPAT slot (QGroupBox::setShown(bool)) _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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