Hi Helen,

we should probably stop distributing that script as it's way old and not supported (the atlas it's trying to use is in a format we don't support anymore). What age subject are you trying to label? If it's >6 or so then you probably are fine using the normal labeling generated by recon-all.

cheers, Bruce

On Thu, 23 Feb 2006 hwier@uchicago.edu wrote:

Hi,

I'm running freesurfer (version 0.9, 33y) and I'm trying to run the label_child script I found in the bin directory, however I'm getting the following error(where my subject directory is called 205):

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Command Line:

...

label_child 205

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Output:

using gca /opt/freesurfer_alpha/average/talairach_children_tl_b.gca to label thin temporal lobe... using /nfs/raidzone/data/NL-GCS/subjects/freesurfer//205/mri/brain to mask final labeling... reading 1 input volumes... reading classifier array from /opt/freesurfer_alpha/average/talairach_children_b.gca... GCAread(/opt/freesurfer_alpha/average/talairach_children_b.gca): couldn't expand gcs to 286990032 Cannot allocate memory

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My computers' resources (from /proc/meminfo) are:

MemTotal: 4148928 kB MemFree: 871196 kB

Can my computer handle running label_child? Am I just calling something incorrectly? Is there anything I could try to change in order to get label_child to run?

Thanks, Helen. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer