Hi John,
Do tkmedit and tksurfer work by themselves? You can try this by running the following commands (assuming your SUBJECTS_DIR is set to the location containinng your subject ALS-0038):
tkmedit ALS-0038 norm.mgz tksurfer ALS-0038 rh pial
Best, Lee
On Tue, 13 Sep 2016, John Anderson wrote:
Hello, FS experts, I am trying to use QA tool: I ran the following command recon_checker -snaps-only -s-file subjects.txt The script output the following: X11 connection rejected because of wrong authentication. GLUT: Fatal Error in tkmedit.bin: could not open display: localhost:12.0 X11 connection rejected because of wrong authentication. GLUT: Fatal Error in tksurfer.bin: could not open display: localhost:12.0 X11 connection rejected because of wrong authentication. GLUT: Fatal Error in tksurfer.bin: could not open display: localhost:12.0 Taking snapshots for subject ALS-0038 X11 connection rejected because of wrong authentication. GLUT: Fatal Error in tkmedit.bin: could not open display: localhost:12.0 X11 connection rejected because of wrong authentication. GLUT: Fatal Error in tksurfer.bin: could not open display: localhost:12.0 X11 connection rejected because of wrong authentication. GLUT: Fatal Error in tksurfer.bin: could not open display: localhost:12.0 At the end it said that he process finshed. I checked the AQ folder and the snaps where not there Any suggestions! Bests, John
freesurfer@nmr.mgh.harvard.edu