Dear all,
I am trying to use the 3D view in freeview to prepare some figures, and would like to be able to rotate the volume along one axis only (e.g., yaw).
Is there a way to constrain the rotation with the mouse, and/or to enter the numerical value of parameters such as azimuth and elevation?
Thanks,
Marco
_____________________
Marco L. Loggia, PhD
Postdoctoral Fellow, Mass General Hospital & Brigham and Women's Hospital
Harvard Medical School
CNY Building 120, suite 101E
Charlestown, Massachusetts 02129
Phone: (617) 643-7267
Fax: (617) 643-7340 marco@nmr.mgh.harvard.edu
Unfortunately no. I'll put that on my list and target it for the next release.
On 11/17/10 9:42 AM, Marco Loggia wrote:
Dear all,
I am trying to use the 3D view in freeview to prepare some figures, and would like to be able to rotate the volume along one axis only (e.g., yaw).
Is there a way to constrain the rotation with the mouse, and/or to enter the numerical value of parameters such as azimuth and elevation?
Thanks,
Marco
Marco L. Loggia, PhD
Postdoctoral Fellow, MassGeneralHospital& Brigham and Women's Hospital
HarvardMedicalSchool
CNYBuilding 120, suite101E
Charlestown, Massachusetts02129
Phone: (617) 643-7267
Fax: (617) 643-7340 marco@nmr.mgh.harvard.edu
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Try using 'mris_decimate_gui' -- if you pass it a --decimationLevel of 1.00, you can view the surface (un-decimated) and add tweak the "Up Vector" and "Position" to move the viewpoint.
Look at 'mris_decimate_gui -h' for more options. You can also on startup specify a view rotation.
HTH -=R
On 11/17/10 09:42 , Marco Loggia wrote:
Dear all,
I am trying to use the 3D view in freeview to prepare some figures, and would like to be able to rotate the volume along one axis only (e.g., yaw).
Is there a way to constrain the rotation with the mouse, and/or to enter the numerical value of parameters such as azimuth and elevation?
Thanks,
Marco
Marco L. Loggia, PhD
Postdoctoral Fellow, MassGeneralHospital& Brigham and Women's Hospital
HarvardMedicalSchool
CNYBuilding 120, suite101E
Charlestown, Massachusetts02129
Phone: (617) 643-7267
Fax: (617) 643-7340 marco@nmr.mgh.harvard.edu
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Thanks Rudolph.
I don't seem to have that command in my path... I take it is not in the standard FreeSurfer distribution (version 5) available here at MGH.
Where do I find it?
Thanks, Marco
-----Original Message----- From: Rudolph Pienaar [mailto:rudolph@nmr.mgh.harvard.edu] Sent: Wednesday, November 17, 2010 10:06 AM To: Marco Loggia Cc: 'freesurfer' Subject: Re: [Freesurfer] 3D view in freeview
Try using 'mris_decimate_gui' -- if you pass it a --decimationLevel of 1.00, you can view the surface (un-decimated) and add tweak the "Up Vector" and "Position" to move the viewpoint.
Look at 'mris_decimate_gui -h' for more options. You can also on startup specify a view rotation.
HTH -=R
On 11/17/10 09:42 , Marco Loggia wrote:
Dear all,
I am trying to use the 3D view in freeview to prepare some figures, and would like to be able to rotate the volume along one axis only (e.g.,
yaw).
Is there a way to constrain the rotation with the mouse, and/or to enter the numerical value of parameters such as azimuth and elevation?
Thanks,
Marco
Marco L. Loggia, PhD
Postdoctoral Fellow, MassGeneralHospital& Brigham and Women's Hospital
HarvardMedicalSchool
CNYBuilding 120, suite101E
Charlestown, Massachusetts02129
Phone: (617) 643-7267
Fax: (617) 643-7340 marco@nmr.mgh.harvard.edu
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
It's in the 'dev' tree. You'll have to source the nmr-dev environment
On 11/17/10 10:24 , Marco Loggia wrote:
Thanks Rudolph.
I don't seem to have that command in my path... I take it is not in the standard FreeSurfer distribution (version 5) available here at MGH.
Where do I find it?
Thanks, Marco
-----Original Message----- From: Rudolph Pienaar [mailto:rudolph@nmr.mgh.harvard.edu] Sent: Wednesday, November 17, 2010 10:06 AM To: Marco Loggia Cc: 'freesurfer' Subject: Re: [Freesurfer] 3D view in freeview
Try using 'mris_decimate_gui' -- if you pass it a --decimationLevel of 1.00, you can view the surface (un-decimated) and add tweak the "Up Vector" and "Position" to move the viewpoint.
Look at 'mris_decimate_gui -h' for more options. You can also on startup specify a view rotation.
HTH -=R
On 11/17/10 09:42 , Marco Loggia wrote:
Dear all,
I am trying to use the 3D view in freeview to prepare some figures, and would like to be able to rotate the volume along one axis only (e.g.,
yaw).
Is there a way to constrain the rotation with the mouse, and/or to enter the numerical value of parameters such as azimuth and elevation?
Thanks,
Marco
Marco L. Loggia, PhD
Postdoctoral Fellow, MassGeneralHospital& Brigham and Women's Hospital
HarvardMedicalSchool
CNYBuilding 120, suite101E
Charlestown, Massachusetts02129
Phone: (617) 643-7267
Fax: (617) 643-7340 marco@nmr.mgh.harvard.edu
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Marco Loggia -
Rudolph Pienaar -
Ruopeng Wang