Hi Vin

are you sure you have space on that disk? Can you run:

mri_info /home/Downloads/reorient/test.nii mri_info /media/results/mri/orig/001.mgz ls -l /media/results/mri/orig/001.mgz /media/results/mri/rawavg.mgz

and send us the results?

cheers Bruce

On Thu, 25 Jul 2019, vin rasa wrote:

External Email - Use Caution

Please also find recon-all.log file.

Thanks!

On Thu, Jul 25, 2019 at 6:50 AM vin rasa vimrasa@gmail.com wrote: Dear Freesurfer experts, Greetings!

In the first minute of recon-all, we are getting following error:

mghRead(/media/results/mri/rawavg.mgz): could not read 262144 bytes at slice 0

T1 data type is int16, data type 4 (looked using fslinfo)

Looking forward to have your input!

Thank you so much, Kind regards