Yes, you can use mri_label2vol. What space is your mask in? You'll need to have a registration file to that registers the two spaces to pass to mri_label2vol.

doug

Ritobrato Datta wrote:

Hello All ,

I have a binary mask - mask.mgh.

I want create a binary volumetric mask from it in the same space and dimension as orig.mgz

Can mri_label2vol be used ? How ? If not, how can this be done ?

Thanks a lot

Ri _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer