Make sure that there is an orig.mgz in $SUBJECTS_DIR/MGXX_SurferOutput/mri Also, make sure to send the full terminal output doug

On 03/28/2013 02:13 PM, Borzello, Mia wrote:

Hi Freesurfers,

I'm in the middle of coregistering a CT and MRI, and after running spmregister --s MGXX_SurferOutput --mov ct.mgz --reg spm.reg.dat --fsvol orig

I get the error that orig.mgz is not found in COR or MGZ formats, but I have an orig.mgz file in my folder. Any help on this would be awesome!

Thanks, Mia

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