The make_average_subject patch can be downloaded here: https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-patch/ The readme file contains some instructions. This patch will definitely fix your recon-all error, but I don’t think it’s related to the labeling issue. Though, it’s worth a try.

best, Andrew

On Nov 30, 2017, at 3:46 AM, M del Mar Velasco <melly_2228@hotmail.commailto:melly_2228@hotmail.com> wrote:

Hi,

We are not using the make_average_subject 6.0.0-patch. Do you think it would be a possible solution? Where can I find that patch?

On the other hand, we've noticed that recon-all, which is a final make_average_subject step, fails. I send you the recon-all.log. However, maybe it is not related with previous issue becuase label files are generated before.

All the best,

M del Mar <error.log><recon-all.log>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer