Hi Patrick

we don't normalize into MNI coords. We compute the transform but process the images in their native space

cheers Bruce On Mon, 21 Nov 2016, Bauer, Patrick M wrote:

Greetings,

I had quick question as to whether the final post-recon anatomical image (ie. T1.mgz) retains the normalization provided by the MNI template or if it is somehow reverted back to a pre-normalization format?

Many thanks,

Patrick Bauer

PGY4 Neurology resident

Medical College of Wisconsin

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