Hi,
I am trying to segment a few scans with freesurfer. Unfortunately, they failed during autorecon2 - the cerebellum not well segmented and the inferior portion looks very bright.
I have attached the images below. I appreciate your suggestions as how to proceed.
Thanks, Deepa.
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did you check to see if the skull stripping worked?
On Fri, 30 Mar 2007, deepa preeti wrote:
Hi,
I am trying to segment a few scans with freesurfer. Unfortunately, they failed during autorecon2 - the cerebellum not well segmented and the inferior portion looks very bright.
I have attached the images below. I appreciate your suggestions as how to proceed.
Thanks, Deepa.
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freesurfer@nmr.mgh.harvard.edu