Dear Anastasia,
I have also uploaded the file with the problem (22995_EM.zip), and this is how my config file looks like after modifications:
set subjlist = (22995) set pathlist = (fmajor_PP) set ncpts = (7) set reinit = (1)
Thanks again!
Best Wishes, Elijah
Hi Elijah - It looks to me like the forceps major had the same problem for both MNI and CVS in this subject, right? This subject has a relatively thin and somewhat convoluted forceps major, so you can try increasing the number of control points, say from 7 to 8. (But I'd try reinitialization first, before changing anything.)
Hope this helps,
a.y
On Thu, 18 Aug 2016, Elijah Mak wrote:
Dear Anastasia, I have also uploaded the file with the problem (22995_EM.zip), and this is how my config file looks like after modifications:
set subjlist = (22995) set pathlist = (fmajor_PP) set ncpts = (7) set reinit = (1)
Thanks again!
Best Wishes, Elijah
--
Elijah Mak
PhD Candidate | Psychiatry
University of Cambridge
Trinity College, Cambridge, CB2 1TQ
freesurfer@nmr.mgh.harvard.edu