can you clarify what you mean by "gray matter segmentation"? We provide both a binary segmentation of gray matter (in the aseg.mgz) as well as various gyral/sulcal parcellations (in e.g. the aparc+aseg.mgz)

cheers Bruce

On Fri, 22 Feb 2019, 潘祖江 wrote:

External Email - Use Caution

Hi all, I have came across a problem.

As we know, by using recon-all command we can get white matter segmentation, but what I need to use is gray matter segmentation, so what could I do to get ideal segmentation?

Hope to get response from someone who concerns.

Thanks.

--

潘祖江 Zujiang Pan

清华大学 计算机科学与技术

Department of Computer Science and Technology

Tsinghua University, 100084

+86 15600487317