Sophie,

Try to add the line MEASURE1 = pial_lgi in the .Qdecrc in your home folder instead, that should make pial_lgi automatically listed in qdec.

Let me know if it doesn't work,

Marie

On Jan 13, 2014, at 8:11 AM, Douglas N Greve <greve@nmr.mgh.harvard.edumailto:greve@nmr.mgh.harvard.edu> wrote:

It has not been incorporated into QDEC. You will have to use mri_glmfit. doug

On 01/13/2014 03:59 AM, Sophie Maingault wrote: Dear FS experts,

I followed this page to measure LGI : http://freesurfer.net/fswiki/LGI I wanted to use it in QDEC, so after running recon-all –cache for pial_lgi, I created the $SUBJECTS_DIR/qdec/.Qdecrc with MEASURE1 = pial_lgi but I don't see it in the measures menu. Do you know why ?

Best regards.

Sophie Maingault

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