Hi Claudia

hmmm, someone else mentioned that mri_cc hangs for them but we've never seen it. If you upload your dataset I'll see if we can replicate the problem Bruce On Fri, 22 Mar 2013, Claudia Dacquino wrote:

Dear Freesurfers, I'm new and I'm starting using Freesurfer. I'm having a problem with one subject, during the cortical reconstruction (recon-all) the process stops at this stage:

mri_cc -aseg aseg.auto_noCCseg.mgz -o aseg.auto.mgz <subjid>

at this point:

final transformation (x=128.0, yr=0.978, zr=0.153):  1.000  -0.003   0.017  -1.456;  0.003   1.000   0.000   8.654; -0.017   0.000   1.000   25.201;  0.000   0.000   0.000   1.000;

without giving me any error message, it just stops.

Do you have some ideas for why it happens?

thanks to everyone, Claudia