Hi,
I am using laptop with 8Gb RAM, i7 Core processor, and enough HDD....
still i m getting same erro ( */usr/local/freesurfer/tktools/tkmedit.bin: Command not found*. ) because i m working on laptop...?
or
"recon-all --help " is working but *tkmedit is not working*
Hope to get response asap.
Thanks in advance.
Saurabh Thakur,
On Tue, Feb 4, 2014 at 2:09 PM, Markus Gschwind markus.gschwind@gmail.comwrote:
Hi Saurabh,
I recently installed FS un ubuntu 12.04, and it was not difficult.
I would recommend that you again download the file from here http://surfer.nmr.mgh.harvard.edu/fswiki/Download (I took the Centos4 file)
to make sure that it is complete.
Than you "untar" the file at any given place (most people recomment /usr/local/ but you need to do it in "sudo" mode).
Then make sure that you put the license file at the right place ( http://surfer.nmr.mgh.harvard.edu/fswiki/LinuxInstall)
and adapt the configuration file ( http://surfer.nmr.mgh.harvard.edu/fswiki/SetupConfiguration)
I used bash and it worked well.
Take care that you have writing permission on the folders you want to use ($SUBJECT_DIR). For that reason I copied the folder "bert" to my home folder in order to be able to run the installation test as recommended here: http://surfer.nmr.mgh.harvard.edu/fswiki/TestingFreeSurfer
Hope that helps! Cheers, Markus
2014-02-04 Saurabh Thakur srbhthkr@gmail.com:
Hello everyone,
Can u anyone help me in simplest and best way to install freesurfer on
*i m not able to run command : *
*1. tkmedit 2. tksurfer.System specification: *
Dell laptop Ubuntu 12.04 LTS RAM 8Gb Graphics cards: Nvidia cards 1 Gb
Thanks in advance.
Saurabh Thakur,
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
I think your hardware is fine, but your software environment needs fixing (see my previous email)
cheers Bruce On Tue, 4 Feb 2014, Saurabh Thakur wrote:
Hi,
I am using laptop with 8Gb RAM, i7 Core processor, and enough HDD....
still i m getting same erro ( /usr/local/freesurfer/tktools/tkmedit.bin: Command not found. ) because i m working on laptop...?
or
"recon-all --help " is working but tkmedit is not working
Hope to get response asap.
Thanks in advance.
Saurabh Thakur,
On Tue, Feb 4, 2014 at 2:09 PM, Markus Gschwind markus.gschwind@gmail.com wrote: Hi Saurabh, I recently installed FS un ubuntu 12.04, and it was not difficult. I would recommend that you again download the file from here http://surfer.nmr.mgh.harvard.edu/fswiki/Download%C2%A0(I took the Centos4 file) to make sure that it is complete. Than you "untar" the file at any given place (most people recomment /usr/local/ but you need to do it in "sudo" mode). Then make sure that you put the license file at the right place (http://surfer.nmr.mgh.harvard.edu/fswiki/LinuxInstall) and adapt the configuration file (http://surfer.nmr.mgh.harvard.edu/fswiki/SetupConfiguration) I used bash and it worked well. Take care that you have writing permission on the folders you want to use ($SUBJECT_DIR). For that reason I copied the folder "bert" to my home folder in order to be able to run the installation test as recommended here: http://surfer.nmr.mgh.harvard.edu/fswiki/TestingFreeSurfer Hope that helps! Cheers, Markus
2014-02-04 Saurabh Thakur srbhthkr@gmail.com: Hello everyone,
Can u anyone help me in simplest and best way to install freesurfer on
i m not able to run command :
- tkmedit
- tksurfer.
System specification:
Dell laptop Ubuntu 12.04 LTS RAM 8Gb Graphics cards: Nvidia cards 1 Gb
Thanks in advance.
Saurabh Thakur,
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Saurabh Thakur