Hi all,
When we do recon-all, we usually do autorecon1, autorecon2, and autorecon3 in sequence. But now suppose I have already have a very good skull-stripped subject. I mean I don't need to do skull-stripping with freesurfer. But I want to get greymatter and white matter, which are generated in autorecon2 and autorecon3. Is there any way to do this?
Looking forward to your early reply.
Best, Xiaoying
Xiaoying, There are directions for how to do this located here: https://surfer.nmr.mgh.harvard.edu/fswiki/UserContributions/FAQ?highlight=%2... Allison
Hi Allison,
You are so helpful. Thanks a lot.
Best, Xiaoying
----- Original Message ----- From: Allison Stevens astevens@nmr.mgh.harvard.edu Date: Friday, March 12, 2010 7:43 am Subject: Re: [Freesurfer] problem on recon-all To: Xiaoying Tang xtang7@jhu.edu Cc: freesurfer@nmr.mgh.harvard.edu
Xiaoying, There are directions for how to do this located here:
Allison
--
On Fri, 12 Mar 2010, Xiaoying Tang wrote:
Hi all,
When we do recon-all, we usually do autorecon1, autorecon2, and
autorecon3 in sequence. But now suppose I have already have a very good skull-stripped subject. I mean I don't need to do skull-stripping with freesurfer. But I want to get greymatter and white matter, which are generated in autorecon2 and autorecon3. Is there any way to do this?
Looking forward to your early reply.
Best, Xiaoying _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu
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Xiaoying Tang