Hello Siya,

What version of perl is on your ubuntu system?

$> perl --version

-Zeke

On 06/05/2016 04:30 PM, siya sherif wrote:

FREESURFER_HOME: /usr/local/freesurfer

Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0

Debian version: jessie/sid

Kernel info: Linux 4.2.0-36-generic x86_64

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Please include the following additional information in your report:

1. subject name

bret4

2. the entire command-line executed

setenv SUBJECTS_DIR /media/brain/C60E9D2E0E9D188F/testFreesurfur recon-all -i ICBM_MNI_0101_MRI_T1-FFE_br_20050118145643139_S6730_I2233.nii -subject bert3 -all

3. the error message generated

#-------------------------------------------- #@# Talairach Fri Jun 3 14:54:45 IST 2016 /media/brain/C60E9D2E0E9D188F/testFreesurfur/bert5/mri

mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50 --no-rescale --i orig.mgz --o orig_nu.mgz

Linux IBT-MS-7971 4.2.0-36-generic #42~14.04.1-Ubuntu SMP Fri May 13 17:27:22 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux

recon-all -s bert5 exited with ERRORS at Fri Jun 3 14:55:29 IST 2016

For more details, see the log file /media/brain/C60E9D2E0E9D188F/testFreesurfur/bert5/scripts/recon-all.log To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting

4. optionally include the subject's /script/recon-all.log

-- Dr. Siya Sherif Ph.D Senior R & D Engineer Neuroimaging & Neurospectroscopy Lab National Brain Research Centre NH-8, Manesar, Gurgaon Haryana-122 051 India

email : siya.physics@gmail.com mailto:siya.physics@gmail.com , siya.sherif@imdea.org mailto:siya.sherif@imdea.org Tel (mob) : +91- 9447753634

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