Try adding --label-stat statvol.mgz to the command

On 2/17/2021 10:16 AM, julienbesle wrote:

     External Email - Use Caution

Hello,

I'm trying to convert label files containing probability values for Brodmann areas (e.g. rh.BA1_exvivo.label) to volume files using mri_label2vol.

I'd like to keep the probability value that's in the 5th column of the label file into the volume, but mri_label2vol sets all voxels in the label to 1 (i.e. creates a mask). Is there a way to do this?

Thanks

Julien