Hi Clare

can you send us the screen output and also what version you are running?

thanks Bruce On Wed, 25 Jul 2012, Gibbard, Clare wrote:

Hello,

I have run several scans using recon-all -all -subjid subject_no -expert expert.opts where my expert.opts file changes the parameters for the mri_normalize step (this works well in my scans).  I then had to edit a few of the scans by adding in more white matter and a few control points.  I re-ran them to incorporate the edits using recon-all -s subject_no -make all -xopts-use.  This worked well.

I then ran recon-all -s subject_no -qcache ready for doing a group analysis.  I got an error reading the curvature file in those subjects I had edited.  I can see from the mailing list that others have had this error previously and ran recon-all -s subject_no -make all to fix it.  I tried this, but I got a message saying that there was nothing to be done for all.

Are you able to advise me on what I can try now?  Do I need to go back a step?

Thank you very much, Clare